WDR60 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

WDR60

WD repeat domain 60. (1067 aa)

Predicted Functional Partners:

WDR34

0.999

TCTEX1D2

0.993

DYNC2LI1

0.991

DYNLL1

0.990

DYNLRB1

0.990

DYNLL2

0.984

DYNLT1

0.964

DYNLT3

0.963

TCTEX1D1

0.958

TCTE3

0.957

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DYNC2LI1	DYNLL1	ENSMMUP00000036573	ENSMMUP00000001597	Dynein cytoplasmic 2 light intermediate chain 1.	Dynein light chain.	0.982
DYNC2LI1	DYNLL2	ENSMMUP00000036573	ENSMMUP00000042814	Dynein cytoplasmic 2 light intermediate chain 1.	Dynein light chain.	0.981
DYNC2LI1	DYNLRB1	ENSMMUP00000036573	ENSMMUP00000037742	Dynein cytoplasmic 2 light intermediate chain 1.	Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.	0.949
DYNC2LI1	DYNLT1	ENSMMUP00000036573	ENSMMUP00000025567	Dynein cytoplasmic 2 light intermediate chain 1.	Dynein light chain Tctex-type 1.	0.754
DYNC2LI1	DYNLT3	ENSMMUP00000036573	ENSMMUP00000017370	Dynein cytoplasmic 2 light intermediate chain 1.	Dynein light chain Tctex-type 3.	0.768
DYNC2LI1	TCTE3	ENSMMUP00000036573	ENSMMUP00000070361	Dynein cytoplasmic 2 light intermediate chain 1.	T-complex-associated-testis-expressed 3.	0.810
DYNC2LI1	TCTEX1D1	ENSMMUP00000036573	ENSMMUP00000067030	Dynein cytoplasmic 2 light intermediate chain 1.	Tctex1 domain containing 1.	0.843
DYNC2LI1	TCTEX1D2	ENSMMUP00000036573	ENSMMUP00000062109	Dynein cytoplasmic 2 light intermediate chain 1.	Uncharacterized protein.	0.963
DYNC2LI1	WDR34	ENSMMUP00000036573	ENSMMUP00000012227	Dynein cytoplasmic 2 light intermediate chain 1.	WD repeat domain 34.	0.983
DYNC2LI1	WDR60	ENSMMUP00000036573	ENSMMUP00000009155	Dynein cytoplasmic 2 light intermediate chain 1.	WD repeat domain 60.	0.991
DYNLL1	DYNC2LI1	ENSMMUP00000001597	ENSMMUP00000036573	Dynein light chain.	Dynein cytoplasmic 2 light intermediate chain 1.	0.982
DYNLL1	DYNLL2	ENSMMUP00000001597	ENSMMUP00000042814	Dynein light chain.	Dynein light chain.	0.999
DYNLL1	DYNLRB1	ENSMMUP00000001597	ENSMMUP00000037742	Dynein light chain.	Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.	0.984
DYNLL1	DYNLT1	ENSMMUP00000001597	ENSMMUP00000025567	Dynein light chain.	Dynein light chain Tctex-type 1.	0.981
DYNLL1	DYNLT3	ENSMMUP00000001597	ENSMMUP00000017370	Dynein light chain.	Dynein light chain Tctex-type 3.	0.962
DYNLL1	TCTE3	ENSMMUP00000001597	ENSMMUP00000070361	Dynein light chain.	T-complex-associated-testis-expressed 3.	0.967
DYNLL1	TCTEX1D1	ENSMMUP00000001597	ENSMMUP00000067030	Dynein light chain.	Tctex1 domain containing 1.	0.970
DYNLL1	TCTEX1D2	ENSMMUP00000001597	ENSMMUP00000062109	Dynein light chain.	Uncharacterized protein.	0.980
DYNLL1	WDR34	ENSMMUP00000001597	ENSMMUP00000012227	Dynein light chain.	WD repeat domain 34.	0.988
DYNLL1	WDR60	ENSMMUP00000001597	ENSMMUP00000009155	Dynein light chain.	WD repeat domain 60.	0.990