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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF8Serine/arginine-rich splicing factor 8. (287 aa)    
Predicted Functional Partners:
SRPK1
Serine/threonine-protein kinase SRPK1.
    
 0.938
ENSMMUP00000067597
RRM domain-containing protein.
   
0.831
SRSF3
RRM domain-containing protein.
   
0.831
SRSF7
Serine and arginine rich splicing factor 7.
   
0.830
TRA2B
Transformer 2 beta homolog.
  
0.824
SRSF1
Uncharacterized protein.
  
0.821
SRSF9
Serine/arginine-rich splicing factor 9.
   
 0.816
ENSMMUP00000041819
Uncharacterized protein.
   
0.802
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.790
ALYREF
RRM domain-containing protein.
  
 0.780
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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