STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (451 aa)    
Predicted Functional Partners:
TAF1B
TATA-box binding protein associated factor, RNA polymerase I subunit B.
   
 0.963
TAF1D
Uncharacterized protein.
    
 0.953
TBP
TATA-box binding protein.
    
 0.944
TAF1C
TATA-box binding protein associated factor, RNA polymerase I subunit C.
    
 0.926
TBPL2
TATA-box binding protein like 2.
    
 0.808
RRN3
Uncharacterized protein.
    
 0.750
POLR1E
RNA polymerase I subunit E.
     
 0.735
UBTF
Nucleolar transcription factor 1 isoform a.
   
 0.699
CD3EAP
CD3e molecule associated protein.
     
 0.690
HINT1
Histidine triad nucleotide-binding protein 1.
    
 0.667
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.