Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCNM1Sodium channel modifier 1 isoform 1. (230 aa)    
Predicted Functional Partners:
ARMC7
Armadillo repeat-containing protein 7.
    
 
 0.783
RNF212
Ring finger protein 212.
      
 0.770
RNF113A
RING finger protein 113A.
   
 
 0.723
SF3B1
SF3b1 domain-containing protein.
    
 
 0.709
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.706
SF3B2
Splicing factor 3B subunit 2.
    
   0.704
CDC5L
Cell division cycle 5-like protein.
    
   0.704
SF3B3
Spliceosome-associated protein 130.
    
   0.704
NID1
Nidogen-1.
      
 0.686
LOC711104
Uncharacterized protein.
      
 0.656
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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