Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3. (558 aa)    
Predicted Functional Partners:
LMOD2
Leiomodin 2.
   
 
0.928
LMOD1
Leiomodin 1.
   
 
0.920
BBS5
Kelch like family member 41.
   
 
 0.863
KLHL40
Kelch like family member 40.
   
 
 0.818
C4orf54
Chromosome 4 open reading frame 54.
   
 
  0.780
TNNI3
Troponin T1, slow skeletal type.
   
 
 0.752
NRAP
Nebulin related anchoring protein.
   
 0.645
MYOM3
Myomesin 3.
   
 
 0.617
MYOZ2
Myozenin 2.
   
 
 0.595
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.568
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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