STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1070 aa)    
Predicted Functional Partners:
BAZ1A
Bromodomain adjacent to zinc finger domain protein 1A isoform a.
    
 0.948
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.922
CECR2
CECR2 histone acetyl-lysine reader.
   
 0.904
POLE3
DNA polymerase epsilon subunit 3.
    
 0.896
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.880
RSF1
Remodeling and spacing factor 1.
   
 0.856
BAZ2B
Bromodomain adjacent to zinc finger domain 2B.
    
 0.815
BAZ2A
Bromodomain adjacent to zinc finger domain 2A.
    
 0.805
HMGN5
Uncharacterized protein.
    
 0.802
CHRAC1
Chromatin accessibility complex protein 1.
    
 
 0.799
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.