FOCAD protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AVEN	FOCAD	ENSMMUP00000045691	ENSMMUP00000011683	Apoptosis and caspase activation inhibitor.	Focadhesin.	0.827
EXOSC4	EXOSC5	ENSMMUP00000075943	ENSMMUP00000018844	Exosome complex component RRP41.	Exosome complex component RRP46.	0.999
EXOSC4	FOCAD	ENSMMUP00000075943	ENSMMUP00000011683	Exosome complex component RRP41.	Focadhesin.	0.483
EXOSC5	EXOSC4	ENSMMUP00000018844	ENSMMUP00000075943	Exosome complex component RRP46.	Exosome complex component RRP41.	0.999
EXOSC5	FOCAD	ENSMMUP00000018844	ENSMMUP00000011683	Exosome complex component RRP46.	Focadhesin.	0.450
EXOSC5	HACD4	ENSMMUP00000018844	ENSMMUP00000070630	Exosome complex component RRP46.	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]	0.401
FOCAD	AVEN	ENSMMUP00000011683	ENSMMUP00000045691	Focadhesin.	Apoptosis and caspase activation inhibitor.	0.827
FOCAD	EXOSC4	ENSMMUP00000011683	ENSMMUP00000075943	Focadhesin.	Exosome complex component RRP41.	0.483
FOCAD	EXOSC5	ENSMMUP00000011683	ENSMMUP00000018844	Focadhesin.	Exosome complex component RRP46.	0.450
FOCAD	HACD4	ENSMMUP00000011683	ENSMMUP00000070630	Focadhesin.	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]	0.786
FOCAD	IFNW1	ENSMMUP00000011683	ENSMMUP00000062942	Focadhesin.	Interferon alpha-II-1.	0.602
FOCAD	IL17REL	ENSMMUP00000011683	ENSMMUP00000069388	Focadhesin.	IL17_R_N domain-containing protein.	0.485
FOCAD	MTHFS	ENSMMUP00000011683	ENSMMUP00000050732	Focadhesin.	5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.	0.469
FOCAD	PRICKLE1	ENSMMUP00000011683	ENSMMUP00000039937	Focadhesin.	Prickle planar cell polarity protein 1.	0.462
FOCAD	SCN2B	ENSMMUP00000011683	ENSMMUP00000065378	Focadhesin.	Sodium voltage-gated channel beta subunit 2.	0.445
FOCAD	ZFAND1	ENSMMUP00000011683	ENSMMUP00000003530	Focadhesin.	Zinc finger AN1-type containing 1.	0.516
HACD4	EXOSC5	ENSMMUP00000070630	ENSMMUP00000018844	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]	Exosome complex component RRP46.	0.401
HACD4	FOCAD	ENSMMUP00000070630	ENSMMUP00000011683	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]	Focadhesin.	0.786
HACD4	IFNW1	ENSMMUP00000070630	ENSMMUP00000062942	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]	Interferon alpha-II-1.	0.587
HACD4	IL17REL	ENSMMUP00000070630	ENSMMUP00000069388	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]	IL17_R_N domain-containing protein.	0.451