Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DHX34DExH-box helicase 34. (1143 aa)    
Predicted Functional Partners:
CDC40
Pre-mRNA-processing factor 17.
   
 0.889
SYT3
Synaptotagmin-3.
    
 0.884
SLU7
Pre-mRNA-splicing factor SLU7.
   
 0.879
CACTIN
Chromosome 19 open reading frame 29.
    
 0.872
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.866
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.856
BSPH1
Binder of sperm protein homolog 1.
      
 0.843
ELSPBP1
Epididymis-specific type IV collagenase-like protein.
      
 0.832
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.814
ALYREF
RRM domain-containing protein.
   
 0.805
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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