Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM47Tripartite motif containing 47. (640 aa)    
Predicted Functional Partners:
DDX58
Putative ATP-dependent RNA helicase DDX58.
   
 0.846
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.818
TRIM67
Tripartite motif containing 67.
   
 0.809
SATB1
DNA-binding protein SATB.
    
   0.744
NUDCD1
NudC domain-containing protein 1 isoform 1.
    
   0.705
SH3GLB1
SH3 domain containing GRB2 like, endophilin B1.
    
   0.703
UBE2N
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.695
SATB2
DNA-binding protein SATB.
    
   0.648
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
    
 
 0.636
CISD1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.622
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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