STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALCOCO1Calcium binding and coiled-coil domain 1. (714 aa)    
Predicted Functional Partners:
MYL6B
Myosin light chain 6B.
    
 0.673
ACBD4
Acyl-CoA binding domain containing 4.
   
  
 0.652
KRT73
Keratin 73; Belongs to the intermediate filament family.
   
 
 0.651
PEX5
Peroxisomal biogenesis factor 5.
      
 0.651
EPB41L2
Erythrocyte membrane protein band 4.1 like 2.
    
 
 0.602
CDK2
Diacylglycerol kinase.
   
  
 0.465
TNFRSF1B
TNF receptor superfamily member 1B.
      
 0.455
CTNNB1
Catenin beta-1.
    
 0.423
GSE1
Gse1 coiled-coil protein.
   
 0.408
VRK1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.403
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.