Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASCC1Uncharacterized protein. (400 aa)    
Predicted Functional Partners:
ASCC2
Activating signal cointegrator 1 complex subunit 2.
    
 0.988
ASCC3
Activating signal cointegrator 1 complex subunit 3 isoform a.
   
 0.985
TRIP4
Thyroid hormone receptor interactor 4.
   
 
 0.958
ASAP2
ArfGAP with SH3 domain, ankyrin repeat and PH domain 2.
      
 0.879
ZNF862
Uncharacterized protein.
      
 0.528
PRR13
Uncharacterized protein.
      
 0.527
MRPL45
39S ribosomal protein L45, mitochondrial.
      
 0.519
HFM1
Helicase for meiosis 1.
    
 0.517
ATL3
Atlastin GTPase 3.
      
 0.517
DDX11
DEAD/H-box helicase 11.
      
 0.484
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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