close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMLHETrimethyllysine dioxygenase, mitochondrial isoform 1. (421 aa)    
Predicted Functional Partners:
AIFM2
Apoptosis inducing factor mitochondria associated 2.
      
 0.823
CDKAL1
CDK5 regulatory subunit associated protein 1 like 1.
      
 0.780
TCF25
Transcription factor 25.
      
 0.683
GLI4
GLI family zinc finger 4.
      
 0.683
RBM4B
RNA binding motif protein 4B.
      
 0.642
RNF44
Ring finger protein 44.
      
 0.629
ALDH9A1
4-trimethylaminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.620
LRRC23
Leucine rich repeat containing 23.
      
 0.615
LIMCH1
LIM and calponin homology domains 1.
      
 0.599
PHRF1
PHD and ring finger domains 1.
      
 0.597
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.