Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGAP3-2ArfGAP with GTPase domain, ankyrin repeat and PH domain 3. (226 aa)    
Predicted Functional Partners:
ZNF507
Zinc finger protein 507.
      
 0.872
TANC1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1.
    
 
 0.777
LHFPL4
Uncharacterized protein.
   
  
 0.771
ONECUT2
One cut domain family member.
   
  
 0.631
KLF14
Kruppel like factor 14.
      
 0.629
AGAP1
Uncharacterized protein.
   
   0.612
GRIA1
Uncharacterized protein.
   
 
 0.587
VGF
VGF nerve growth factor inducible.
      
 0.526
UNC5B
Unc-5 netrin receptor B.
    
 0.507
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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