Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMNTD1Lamin tail domain containing 1. (399 aa)    
Predicted Functional Partners:
GPR87
G protein-coupled receptor 87; Belongs to the G-protein coupled receptor 1 family.
      
 0.875
RASSF8
Ras association domain-containing protein 8 isoform a.
      
 0.833
CSRNP3
Cysteine/serine-rich nuclear protein 3.
      
 0.802
SEC31A
SEC31 homolog A, COPII coat complex component.
      
 0.774
MYO3A
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.766
WDR48
WD repeat domain 48.
      
 0.732
LEMD3
Inner nuclear membrane protein Man1 isoform 1.
    
 0.708
BANF2
Barrier to autointegration factor 2.
    
 0.643
TRIM33
Tripartite motif containing 33.
    
 0.639
MAP3K5
Mitogen-activated protein kinase kinase kinase 5.
      
 0.633
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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