Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXO39F-box protein 39. (440 aa)    
Predicted Functional Partners:
SKP1-2
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.624
NME8
NME/NM23 family member 8.
   
 
 0.584
CCER1
Coiled-coil glutamate rich protein 1.
    
 
 0.584
CCDC38
Coiled-coil domain containing 38.
    
 
 0.573
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.564
CLDND2
Claudin domain containing 2.
      
 0.564
TMEM89
Uncharacterized protein.
      
 0.564
PCOLCE
Procollagen C-endopeptidase enhancer.
   
  
 0.532
CCDC85B
Coiled-coil domain-containing protein 85B.
   
  
 0.527
FZR1
Fizzy and cell division cycle 20 related 1.
   
 
 0.522
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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