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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R3HDM4R3H domain containing 4. (372 aa)    
Predicted Functional Partners:
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.933
ERG28
Putative ergosterol biosynthetic protein 28.
   
 
 0.904
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
 
 0.739
FDFT1
Uncharacterized protein.
   
 
 0.739
SC5D
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.658
CH25H
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.653
MSMO1
C-4 methylsterol oxidase isoform 1; Belongs to the sterol desaturase family.
   
 0.653
FAXDC2
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.653
TM7SF2
Delta(14)-sterol reductase.
   
 
 0.629
LBR
Lamin-B receptor.
   
 
 0.628
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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