Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAVIN4Uncharacterized protein. (454 aa)    
Predicted Functional Partners:
GDF1
TGF_BETA_2 domain-containing protein.
    
 0.728
ZDHHC5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.723
MUC12
Uncharacterized protein.
    
 0.596
CLDND1
Uncharacterized protein.
    
   0.531
ST8SIA6
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
      
 0.528
ZDHHC8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.495
GDF3
Growth differentiation factor 3.
    
 0.492
DCLK1
Doublecortin like kinase 1.
   
  
 0.490
PTPRR
Protein tyrosine phosphatase receptor type R.
      
 0.486
TLK1
Serine/threonine-protein kinase tousled-like 1 isoform 1.
      
 0.477
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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