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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAVIN4Uncharacterized protein. (454 aa)    
Predicted Functional Partners:
GDF1
TGF_BETA_2 domain-containing protein.
    
 0.715
MUC12
Uncharacterized protein.
    
 
 0.587
GDF3
Growth differentiation factor 3.
    
 0.499
TDGF1
Growth factor; Belongs to the EGF-CFC (Cripto-1/FRL1/Cryptic) family.
    
 
 0.491
DCLK1
Doublecortin like kinase 1.
   
  
 0.481
PTPRR
Protein tyrosine phosphatase receptor type R.
      
 0.473
ST8SIA6
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
   
  
 0.442
BMP7
Bone morphogenetic protein 7.
   
 0.437
ZDHHC5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.418
MGP
Matrix Gla protein; Associates with the organic matrix of bone and cartilage.
      
 0.418
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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