USP31 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

USP31

Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family. (1352 aa)

Predicted Functional Partners:

FBXO21

0.769

ARHGEF33

0.658

PCNA

0.647

FGFBP3

0.606

ANO9

0.582

RFC4

0.580

USP10

0.566

POLH

0.559

RFC3

0.556

RFC2

0.544

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANO9	ARHGEF33	ENSMMUP00000069426	ENSMMUP00000046282	Anoctamin.	Rho guanine nucleotide exchange factor 33.	0.482
ANO9	FGFBP3	ENSMMUP00000069426	ENSMMUP00000061832	Anoctamin.	Fibroblast growth factor binding protein 3.	0.515
ANO9	USP31	ENSMMUP00000069426	ENSMMUP00000012887	Anoctamin.	Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family.	0.582
ARHGEF33	ANO9	ENSMMUP00000046282	ENSMMUP00000069426	Rho guanine nucleotide exchange factor 33.	Anoctamin.	0.482
ARHGEF33	FGFBP3	ENSMMUP00000046282	ENSMMUP00000061832	Rho guanine nucleotide exchange factor 33.	Fibroblast growth factor binding protein 3.	0.803
ARHGEF33	USP31	ENSMMUP00000046282	ENSMMUP00000012887	Rho guanine nucleotide exchange factor 33.	Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family.	0.658
FBXO21	FGFBP3	ENSMMUP00000061845	ENSMMUP00000061832	F-box protein 21.	Fibroblast growth factor binding protein 3.	0.426
FBXO21	USP31	ENSMMUP00000061845	ENSMMUP00000012887	F-box protein 21.	Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family.	0.769
FGFBP3	ANO9	ENSMMUP00000061832	ENSMMUP00000069426	Fibroblast growth factor binding protein 3.	Anoctamin.	0.515
FGFBP3	ARHGEF33	ENSMMUP00000061832	ENSMMUP00000046282	Fibroblast growth factor binding protein 3.	Rho guanine nucleotide exchange factor 33.	0.803
FGFBP3	FBXO21	ENSMMUP00000061832	ENSMMUP00000061845	Fibroblast growth factor binding protein 3.	F-box protein 21.	0.426
FGFBP3	USP31	ENSMMUP00000061832	ENSMMUP00000012887	Fibroblast growth factor binding protein 3.	Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family.	0.606
PCNA	POLH	ENSMMUP00000062455	ENSMMUP00000011676	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DNA polymerase eta.	0.983
PCNA	RFC2	ENSMMUP00000062455	ENSMMUP00000005125	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Replication factor C subunit 2.	0.992
PCNA	RFC3	ENSMMUP00000062455	ENSMMUP00000004492	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Replication factor C subunit 3 isoform 1.	0.993
PCNA	RFC4	ENSMMUP00000062455	ENSMMUP00000004943	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Replication factor C subunit 4.	0.997
PCNA	USP10	ENSMMUP00000062455	ENSMMUP00000060296	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.	0.820
PCNA	USP31	ENSMMUP00000062455	ENSMMUP00000012887	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family.	0.647
POLH	PCNA	ENSMMUP00000011676	ENSMMUP00000062455	DNA polymerase eta.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.983
POLH	RFC2	ENSMMUP00000011676	ENSMMUP00000005125	DNA polymerase eta.	Replication factor C subunit 2.	0.708