LOC698741 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC698741

Uncharacterized protein. (191 aa)

Predicted Functional Partners:

RPS26

0.782

ENSMMUP00000055062

0.782

TSR1

0.771

RPF2

0.740

NGDN

0.734

TWISTNB

0.726

RRS1

0.724

TSR3

0.722

IMP4

0.704

NOB1

0.701

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMMUP00000055062	LOC698741	ENSMMUP00000055062	ENSMMUP00000013133	annotation not available	Uncharacterized protein.	0.782
ENSMMUP00000055062	NOB1	ENSMMUP00000055062	ENSMMUP00000008570	annotation not available	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.710
ENSMMUP00000055062	TSR1	ENSMMUP00000055062	ENSMMUP00000023063	annotation not available	TSR1 ribosome maturation factor.	0.724
IMP4	LOC698741	ENSMMUP00000012581	ENSMMUP00000013133	IMP U3 small nucleolar ribonucleoprotein 4.	Uncharacterized protein.	0.704
IMP4	NGDN	ENSMMUP00000012581	ENSMMUP00000019386	IMP U3 small nucleolar ribonucleoprotein 4.	Neuroguidin isoform 1.	0.968
IMP4	NOB1	ENSMMUP00000012581	ENSMMUP00000008570	IMP U3 small nucleolar ribonucleoprotein 4.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.850
IMP4	RPF2	ENSMMUP00000012581	ENSMMUP00000045388	IMP U3 small nucleolar ribonucleoprotein 4.	Ribosome production factor 2 homolog.	0.960
IMP4	RRS1	ENSMMUP00000012581	ENSMMUP00000001186	IMP U3 small nucleolar ribonucleoprotein 4.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.880
IMP4	TSR1	ENSMMUP00000012581	ENSMMUP00000023063	IMP U3 small nucleolar ribonucleoprotein 4.	TSR1 ribosome maturation factor.	0.835
IMP4	TSR3	ENSMMUP00000012581	ENSMMUP00000008469	IMP U3 small nucleolar ribonucleoprotein 4.	Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis.	0.426
IMP4	TWISTNB	ENSMMUP00000012581	ENSMMUP00000012575	IMP U3 small nucleolar ribonucleoprotein 4.	DNA-directed RNA polymerase I subunit RPA43.	0.858
LOC698741	ENSMMUP00000055062	ENSMMUP00000013133	ENSMMUP00000055062	Uncharacterized protein.	annotation not available	0.782
LOC698741	IMP4	ENSMMUP00000013133	ENSMMUP00000012581	Uncharacterized protein.	IMP U3 small nucleolar ribonucleoprotein 4.	0.704
LOC698741	NGDN	ENSMMUP00000013133	ENSMMUP00000019386	Uncharacterized protein.	Neuroguidin isoform 1.	0.734
LOC698741	NOB1	ENSMMUP00000013133	ENSMMUP00000008570	Uncharacterized protein.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.701
LOC698741	RPF2	ENSMMUP00000013133	ENSMMUP00000045388	Uncharacterized protein.	Ribosome production factor 2 homolog.	0.740
LOC698741	RPS26	ENSMMUP00000013133	ENSMMUP00000022425	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.782
LOC698741	RRS1	ENSMMUP00000013133	ENSMMUP00000001186	Uncharacterized protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.724
LOC698741	TSR1	ENSMMUP00000013133	ENSMMUP00000023063	Uncharacterized protein.	TSR1 ribosome maturation factor.	0.771
LOC698741	TSR3	ENSMMUP00000013133	ENSMMUP00000008469	Uncharacterized protein.	Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis.	0.722