Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EMG1Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
FCF1
rRNA-processing protein FCF1 homolog.
   
 0.991
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
  
 0.991
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.989
WDR46
WD repeat domain 46.
   
 0.989
NOP14
NOP14 nucleolar protein.
   
 0.989
UTP20
UTP20 small subunit processome component.
   
 0.988
PDCD11
Programmed cell death 11.
   
 0.987
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.984
UTP25
Digestive organ expansion factor homolog.
   
 0.962
UTP4
UTP4 small subunit processome component.
   
 0.962
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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