SNRNP27 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHERP	SART1	ENSMMUP00000079945	ENSMMUP00000064506	Calcium homeostasis endoplasmic reticulum protein.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.562
CHERP	SNRNP27	ENSMMUP00000079945	ENSMMUP00000013388	Calcium homeostasis endoplasmic reticulum protein.	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein.	0.741
ENSMMUP00000054359	LSM2	ENSMMUP00000054359	ENSMMUP00000043635	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.901
ENSMMUP00000054359	LSM7	ENSMMUP00000054359	ENSMMUP00000047537	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.978
ENSMMUP00000054359	PRPF3	ENSMMUP00000054359	ENSMMUP00000021413	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 3.	0.987
ENSMMUP00000054359	PRPF4	ENSMMUP00000054359	ENSMMUP00000007706	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U4/U6 small nuclear ribonucleoprotein Prp4.	0.987
ENSMMUP00000054359	RBM42	ENSMMUP00000054359	ENSMMUP00000024943	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RNA-binding motif protein 42.	0.716
ENSMMUP00000054359	SART1	ENSMMUP00000054359	ENSMMUP00000064506	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.978
ENSMMUP00000054359	SNRNP27	ENSMMUP00000054359	ENSMMUP00000013388	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein.	0.668
ENSMMUP00000054359	USP39	ENSMMUP00000054359	ENSMMUP00000023430	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Ubiquitin specific peptidase 39.	0.788
LSM2	ENSMMUP00000054359	ENSMMUP00000043635	ENSMMUP00000054359	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.901
LSM2	LSM7	ENSMMUP00000043635	ENSMMUP00000047537	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.996
LSM2	PRPF3	ENSMMUP00000043635	ENSMMUP00000021413	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pre-mRNA processing factor 3.	0.987
LSM2	PRPF4	ENSMMUP00000043635	ENSMMUP00000007706	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U4/U6 small nuclear ribonucleoprotein Prp4.	0.987
LSM2	RBM42	ENSMMUP00000043635	ENSMMUP00000024943	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RNA-binding motif protein 42.	0.716
LSM2	SART1	ENSMMUP00000043635	ENSMMUP00000064506	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.978
LSM2	SNRNP27	ENSMMUP00000043635	ENSMMUP00000013388	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein.	0.668
LSM2	SRPK2	ENSMMUP00000043635	ENSMMUP00000066084	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	SRSF protein kinase 2.	0.499
LSM2	USP39	ENSMMUP00000043635	ENSMMUP00000023430	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Ubiquitin specific peptidase 39.	0.788
LSM7	ENSMMUP00000054359	ENSMMUP00000047537	ENSMMUP00000054359	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.978