Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCERG1LTranscription elongation regulator 1 like. (586 aa)    
Predicted Functional Partners:
CDC40
Pre-mRNA-processing factor 17.
    
 0.870
MFAP1
Microfibrillar-associated protein 1.
   
 0.861
RBM25
RNA binding motif protein 25.
   
 
 0.853
PRPF38A
Pre-mRNA-splicing factor 38A.
   
 0.837
RBM22
Pre-mRNA-splicing factor RBM22.
   
 0.836
ZMAT2
Zinc finger matrin-type 2.
    
  0.804
RBM39
RNA-binding protein 39 isoform a.
   
 0.781
CWC15
Protein CWC15 homolog.
   
 0.772
PRPF4B
Serine/threonine-protein kinase PRP4 homolog.
   
 0.766
U2SURP
U2 snRNP associated SURP domain containing.
   
   0.757
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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