STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM3Tropomyosin 3; Belongs to the tropomyosin family. (285 aa)    
Predicted Functional Partners:
TNNT2
Troponin T2, cardiac type.
   
 0.984
TPM4
Tropomyosin alpha-4 chain isoform 1; Belongs to the tropomyosin family.
  
0.963
ACTC1
Actin alpha cardiac muscle 1.
   
 0.962
TPM2
Tropomyosin beta chain isoform 2; Belongs to the tropomyosin family.
  
  
0.902
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.824
ACTA1
Actin alpha 1, skeletal muscle.
   
 0.800
MYL1
Myosin light chain 1.
   
 0.789
TNNI2
Troponin I2, fast skeletal type.
   
 0.788
CAPZA1
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
 0.741
TNNI3
Troponin T1, slow skeletal type.
   
 0.734
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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