ZNF473 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ZNF473

Uncharacterized protein. (871 aa)

Predicted Functional Partners:

VRK3

0.729

LSM10

0.670

OR5L1

0.665

PDZRN3

0.625

SLBP

0.608

NIPA2

0.602

SPOP

0.601

LSM11

0.589

THSD7B

0.582

AKAP9

0.501

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKAP9	NIPA2	ENSMMUP00000073619	ENSMMUP00000069453	A-kinase anchoring protein 9.	Non-imprinted in Prader-Willi/Angelman syndrome region protein 2.	0.482
AKAP9	OR5L1	ENSMMUP00000073619	ENSMMUP00000061787	A-kinase anchoring protein 9.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.510
AKAP9	PDZRN3	ENSMMUP00000073619	ENSMMUP00000016631	A-kinase anchoring protein 9.	PDZ domain containing ring finger 3.	0.506
AKAP9	THSD7B	ENSMMUP00000073619	ENSMMUP00000050086	A-kinase anchoring protein 9.	Thrombospondin type 1 domain containing 7B.	0.426
AKAP9	ZNF473	ENSMMUP00000073619	ENSMMUP00000014201	A-kinase anchoring protein 9.	Uncharacterized protein.	0.501
LSM10	LSM11	ENSMMUP00000022811	ENSMMUP00000078185	U7 snRNA-associated Sm-like protein LSm10.	LSM11, U7 small nuclear RNA associated.	0.994
LSM10	SLBP	ENSMMUP00000022811	ENSMMUP00000059768	U7 snRNA-associated Sm-like protein LSm10.	Stem-loop binding protein.	0.893
LSM10	ZNF473	ENSMMUP00000022811	ENSMMUP00000014201	U7 snRNA-associated Sm-like protein LSm10.	Uncharacterized protein.	0.670
LSM11	LSM10	ENSMMUP00000078185	ENSMMUP00000022811	LSM11, U7 small nuclear RNA associated.	U7 snRNA-associated Sm-like protein LSm10.	0.994
LSM11	SLBP	ENSMMUP00000078185	ENSMMUP00000059768	LSM11, U7 small nuclear RNA associated.	Stem-loop binding protein.	0.867
LSM11	ZNF473	ENSMMUP00000078185	ENSMMUP00000014201	LSM11, U7 small nuclear RNA associated.	Uncharacterized protein.	0.589
NIPA2	AKAP9	ENSMMUP00000069453	ENSMMUP00000073619	Non-imprinted in Prader-Willi/Angelman syndrome region protein 2.	A-kinase anchoring protein 9.	0.482
NIPA2	OR5L1	ENSMMUP00000069453	ENSMMUP00000061787	Non-imprinted in Prader-Willi/Angelman syndrome region protein 2.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.607
NIPA2	PDZRN3	ENSMMUP00000069453	ENSMMUP00000016631	Non-imprinted in Prader-Willi/Angelman syndrome region protein 2.	PDZ domain containing ring finger 3.	0.581
NIPA2	SPOP	ENSMMUP00000069453	ENSMMUP00000059498	Non-imprinted in Prader-Willi/Angelman syndrome region protein 2.	Speckle type BTB/POZ protein.	0.452
NIPA2	THSD7B	ENSMMUP00000069453	ENSMMUP00000050086	Non-imprinted in Prader-Willi/Angelman syndrome region protein 2.	Thrombospondin type 1 domain containing 7B.	0.529
NIPA2	ZNF473	ENSMMUP00000069453	ENSMMUP00000014201	Non-imprinted in Prader-Willi/Angelman syndrome region protein 2.	Uncharacterized protein.	0.602
OR5L1	AKAP9	ENSMMUP00000061787	ENSMMUP00000073619	G_PROTEIN_RECEP_F1_2 domain-containing protein.	A-kinase anchoring protein 9.	0.510
OR5L1	NIPA2	ENSMMUP00000061787	ENSMMUP00000069453	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Non-imprinted in Prader-Willi/Angelman syndrome region protein 2.	0.607
OR5L1	PDZRN3	ENSMMUP00000061787	ENSMMUP00000016631	G_PROTEIN_RECEP_F1_2 domain-containing protein.	PDZ domain containing ring finger 3.	0.610