Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM9Tripartite motif containing 9. (776 aa)    
Predicted Functional Partners:
BTRC
Uncharacterized protein.
    
 0.912
VASP
Vasodilator stimulated phosphoprotein.
    
 
 0.747
FBXW11
Uncharacterized protein.
    
 0.746
DCC
DCC netrin 1 receptor.
   
 
 0.725
NEO1
Neogenin 1.
   
 
 0.714
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
   
 
 0.711
SNAP25
Synaptosomal-associated protein 25; t-SNARE involved in the molecular regulation of neurotransmitter release. May play an important role in the synaptic function of specific neuronal systems. Associates with proteins involved in vesicle docking and membrane fusion. Regulates plasma membrane recycling through its interaction with CENPF. Modulates the gating characteristics of the delayed rectifier voltage-dependent potassium channel KCNB1 in pancreatic beta cells. Belongs to the SNAP-25 family.
   
 
 0.685
TRIM44
Tripartite motif containing 44.
    
 
 0.659
TRIM11
E3 ubiquitin-protein ligase TRIM11.
   
 0.607
TRIM29
Tripartite motif-containing protein 29.
   
 0.594
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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