Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAP2Uncharacterized protein. (843 aa)    
Predicted Functional Partners:
TAP1
Proteasome subunit beta 8.
  
0.999
TAPBP
TAP binding protein.
   
 0.990
ABCB9
Uncharacterized protein.
   
 0.975
CALR
Calreticulin.
   
 0.956
TAPBPL
Uncharacterized protein.
   
 
 0.952
PDIA3
Protein disulfide-isomerase.
   
 0.951
PSMB9
Proteasome subunit beta.
   
 0.787
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).
   
0.754
HLA-E
Major histocompatibility complex, class I, E; Belongs to the MHC class I family.
   
 0.750
PSMB6
Proteasome subunit beta.
   
 0.709
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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