Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMA1Uncharacterized protein. (528 aa)    
Predicted Functional Partners:
LAMC1
Laminin subunit gamma-1.
 
 
 0.975
DAG1
Dystroglycan preproprotein.
    
 0.935
LAMA2
Laminin subunit alpha 2.
    
0.928
LAMB1
Laminin subunit beta 1.
 
  
 0.918
LAMC3
Laminin subunit gamma 3.
 
 
 0.913
CD44
Phagocytic glycoprotein I.
     
 0.904
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
    
 0.833
ITGA2
Integrin subunit alpha 2; Belongs to the integrin alpha chain family.
    
 0.824
ITGA6
Integrin alpha-6 isoform a; Belongs to the integrin alpha chain family.
    
 0.820
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.819
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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