Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SYT13Synaptotagmin-13. (426 aa)    
Predicted Functional Partners:
ODF1
Outer dense fiber of sperm tails 1.
      
 0.646
SPATA20
Spermatogenesis-associated protein 20; May play a role in fertility regulation.
      
 0.642
CCIN
BTB domain-containing protein.
      
 0.638
SAPCD2
Suppressor APC domain containing 2.
      
 0.602
SPATA18
Spermatogenesis associated 18.
      
 0.598
PTN
Uncharacterized protein.
      
 0.596
RTN1
Reticulon.
    
 
 0.592
DNAH9
Dynein axonemal heavy chain 9.
   
  
 0.587
CLSTN3
Calsyntenin 3.
   
 
 0.583
VAMP1
Vesicle-associated membrane protein 2; Involved in the targeting and/or fusion of transport vesicles to their target membrane. Modulates the gating characteristics of the delayed rectifier voltage-dependent potassium channel KCNB1. Belongs to the synaptobrevin family.
    
 0.578
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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