Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EBF3EBF transcription factor 3. (558 aa)    
Predicted Functional Partners:
EBF2
IPT/TIG domain-containing protein.
   
   0.923
EBF4
EBF family member 4.
   
   0.727
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2.
    
   0.696
DAB1
DAB adaptor protein 1.
      
 0.673
CHD5
Chromodomain helicase DNA binding protein 5.
    
 0.599
ZNF521
Zinc finger protein 521.
   
 0.589
CHAT
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
      
 0.587
PAX5
Paired box 5.
   
 
 0.555
LHX2
LIM/homeobox protein Lhx2.
   
 
 0.535
ZNF423
Zinc finger protein 423.
   
 0.532
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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