Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYF6Myogenic factor 6. (242 aa)    
Predicted Functional Partners:
TCF12
Transcription factor 12 isoform a.
    
 0.863
TCF4
Transcription factor 4.
    
 0.857
TCF3
Transcription factor 3.
    
 0.841
SALL1
Spalt like transcription factor 1.
   
 
 0.779
PAX3
Paired box 3.
   
 
 0.756
ID4
DNA-binding protein inhibitor ID-4.
    
 
 0.724
MEF2A
Myocyte-specific enhancer factor 2A isoform 2.
    
 0.705
MEF2D
Myocyte-specific enhancer factor 2D.
    
 0.703
MEF2B
MADS-box domain-containing protein.
    
 0.694
KDR
Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
      
 0.689
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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