Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RFPL1Uncharacterized protein. (317 aa)    
Predicted Functional Partners:
PRAMEF12
PRAME family member 12.
   
  
 0.804
ASNSD1
Glutamine amidotransferase type-2 domain-containing protein.
    
   0.541
HSPB2
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
    
   0.518
ZSCAN4
Zinc finger and SCAN domain containing 4.
    
 0.505
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.497
DAB2IP
DAB2 interacting protein.
    
   0.460
MCPH1
Uncharacterized protein.
    
 
 0.431
PAX6
Uncharacterized protein.
    
 0.429
BTBD8
BTB domain containing 8.
    
 
 0.428
CWC15
Protein CWC15 homolog.
      
 0.423
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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