STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA6DSemaphorin-6D isoform 4; Belongs to the semaphorin family. (1086 aa)    
Predicted Functional Partners:
PLXNA1
Plexin A1.
    
0.937
PLXNA2
Plexin A2.
    
0.803
PLXNA4
Plexin A4.
    
0.800
PLXNA3
Plexin A3.
    
0.799
SLIT1
Slit guidance ligand 1.
      
 0.671
SLC25A21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.663
TMEM38B
Trimeric intracellular cation channel type B.
      
 0.630
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.619
MST1R
Macrophage stimulating 1 receptor.
    
 0.617
MET
Uncharacterized protein.
   
 0.617
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.