STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM7RNA-binding protein 7. (267 aa)    
Predicted Functional Partners:
ZCCHC8
Zinc finger CCHC-type containing 8.
   
 
 0.992
MTREX
Mtr4 exosome RNA helicase.
   
 0.935
SRRT
Serrate RNA effector molecule homolog isoform a.
    
 0.853
SF3B2
Splicing factor 3B subunit 2.
    
 0.808
EXOSC8
Exosome component 8.
   
 
 0.776
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.753
EXOSC3
Exosome complex component RRP40 isoform 1.
   
 
 0.745
THOC1
THO complex subunit 1.
      
 0.712
RBM25
RNA binding motif protein 25.
     
 0.711
DHX9
ATP-dependent RNA helicase A.
    
 0.684
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.