Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
XPAXPA, DNA damage recognition and repair factor. (294 aa)    
Predicted Functional Partners:
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
    
 0.993
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.988
ERCC3
TFIIH basal transcription factor complex helicase XPB subunit.
    
 0.975
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 0.973
BIVM
BIVM-ERCC5 readthrough.
    
 0.972
ERCC2
TFIIH basal transcription factor complex helicase XPD subunit isoform 1.
    
 0.965
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
 0.964
GTF2H5
General transcription factor IIH subunit 5.
    
 0.964
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.961
GTF2H4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.944
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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