Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX15Sorting nexin-15 isoform A. (342 aa)    
Predicted Functional Partners:
RINT1
RAD50-interacting protein 1.
   
 0.753
STX18
Syntaxin-18.
   
 0.753
ZW10
Zw10 kinetochore protein.
   
 0.741
REEP6
Receptor expression-enhancing protein.
    
 
 0.741
NBAS
Neuroblastoma amplified sequence.
    
 0.732
RTN4
Reticulon.
    
   0.701
USE1
Uncharacterized protein.
    
 0.692
LOC114675575
Uncharacterized protein.
    
 0.692
VWA5A
Von Willebrand factor A domain containing 5A.
    
 
 0.648
TMEM63C
Transmembrane protein 63C.
      
 0.640
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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