STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM1Transglutaminase 1. (818 aa)    
Predicted Functional Partners:
IVL
Involucrin.
    
 0.845
PPL
Periplakin.
     
 0.812
EVPL
Envoplakin.
     
 0.808
F13B
Coagulation factor XIII B chain.
    
 0.763
LOR
Uncharacterized protein.
     
 0.695
ABCA12
ATP binding cassette subfamily A member 12.
   
  
 0.638
NIPAL4
NIPA like domain containing 4.
   
  
 0.629
CDSN
Corneodesmosin; Important for the epidermal barrier integrity.
   
 
 0.606
TTC28
Tetratricopeptide repeat domain 28.
   
  
 0.602
STK40
Serine/threonine-protein kinase 40.
   
  
 0.600
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.