Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RARARetinoic acid receptor alpha isoform 1. (462 aa)    
Predicted Functional Partners:
RXRA
Retinoid X receptor alpha.
   
0.997
PML
Promyelocytic leukemia protein.
    
 0.996
RXRB
Retinoid X receptor beta.
   
0.990
RXRG
Retinoid X receptor gamma.
   
0.989
ZBTB16
Uncharacterized protein.
    
 0.967
NCOR1
Nuclear receptor corepressor 1.
    
 0.962
NCOR2
Nuclear receptor corepressor 2.
    
 0.951
NCOA2
Nuclear receptor coactivator.
    
 0.924
NCOA1
Nuclear receptor coactivator.
    
 0.924
NRIP1
Nuclear receptor interacting protein 1.
    
 0.924
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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