Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM61Tripartite motif containing 61. (209 aa)    
Predicted Functional Partners:
TMEM192
Transmembrane protein 192.
    
 0.773
ZNF558
Uncharacterized protein.
    
 0.717
ZNF736
Zinc finger protein 736.
    
 0.533
TRIM46
Tripartite motif-containing protein 46.
   
  
 0.524
TRIM54
Tripartite motif containing 54.
    
 
 0.488
MAK
Male germ cell associated kinase.
   
  
 0.456
ICOS
Inducible T-cell costimulator.
   
 0.451
SQSTM1
Sequestosome 1.
    
 0.445
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.417
TRIM9
Tripartite motif containing 9.
   
 0.407
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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