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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH8G-patch domain containing 8. (1530 aa)    
Predicted Functional Partners:
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
  
   0.623
DDA1
DET1-and DDB1-associated protein 1.
      
 0.604
DDX10
RNA helicase.
    
 0.576
NOL6
Nucleolar protein 6.
   
 
 0.550
UTP6
U3 small nucleolar RNA-associated protein 6 homolog.
    
 
 0.530
DQX1
DEAQ-box RNA dependent ATPase 1.
    
 0.529
DHX32
DEAH-box helicase 32 (putative).
    
 0.529
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 0.529
BYSL
Bystin like.
    
 
 0.524
RRP36
Ribosomal RNA processing 36.
   
   0.521
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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