Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAD9BCell cycle checkpoint control protein; Belongs to the rad9 family. (389 aa)    
Predicted Functional Partners:
RAD1
Uncharacterized protein.
    
 0.995
ATR
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.981
RAD9A
Cell cycle checkpoint control protein; Belongs to the rad9 family.
  
  
0.945
TOPBP1
Uncharacterized protein.
    
 0.917
RAD17
RAD17 checkpoint clamp loader component.
   
 0.913
WRN
WRN RecQ like helicase.
   
 0.890
ATM
Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...]
    
 0.870
RFC2
Replication factor C subunit 2.
   
 0.863
RFC4
Replication factor C subunit 4.
   
 0.858
RAD52
RAD52 homolog, DNA repair protein.
    
 0.840
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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