Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA4Spermatogenesis-associated 4. (305 aa)    
Predicted Functional Partners:
FANK1
Fibronectin type III and ankyrin repeat domains 1.
   
 
 0.858
SPATA17
Spermatogenesis associated 17.
   
 
 0.775
SPAG6
Sperm associated antigen 6.
   
 0.725
ZCCHC3
Zinc finger CCHC-type containing 3.
      
 0.669
TFAP2D
Transcription factor AP-2 delta.
      
 0.667
DFFB
DNA fragmentation factor subunit beta.
     
  0.659
AGPAT5
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon.
      
 0.659
SPAG17
Sperm associated antigen 17.
    
 
 0.648
RWDD2A
RWD domain-containing protein.
      
 0.642
CCDC183
Coiled-coil domain containing 183.
      
 0.639
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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