Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRUB2TruB pseudouridine synthase family member 2. (331 aa)    
Predicted Functional Partners:
FASTKD2
FAST kinase domains 2.
   
 0.932
RCC1L
RCC1 like.
   
 0.897
PUS1
PseudoU_synth_1 domain-containing protein.
   
 0.897
MTERF3
Mitochondrial transcription termination factor 3.
   
 0.890
LOC701554
Uncharacterized protein.
    
 0.856
NGRN
Neugrin.
    
 0.856
RPUSD4
RNA pseudouridine synthase D4.
  
 0.849
DDX28
DEAD-box helicase 28.
  
 
 0.848
RPUSD3
RNA pseudouridine synthase D3.
  
 0.842
NOP58
NOP58 ribonucleoprotein.
  
 
 0.828
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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