Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNOT1CCR4-NOT transcription complex subunit 1. (2376 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 0.999
CNOT3
CCR4-NOT transcription complex subunit 3.
   
 0.999
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 0.998
CNOT10
CCR4-NOT transcription complex subunit 10.
   
 0.998
CNOT8
CCR4-NOT transcription complex subunit 8.
   
 0.998
CNOT7
Uncharacterized protein.
   
 0.996
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.994
CNOT6L
Endo/exonuclease/phosphatase domain-containing protein.
   
 0.991
CNOT6
CCR4-NOT transcription complex subunit 6.
   
 0.973
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
   
 0.958
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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