Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOMEZHomeobox and leucine zipper encoding. (549 aa)    
Predicted Functional Partners:
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.635
CMYA5
Cardiomyopathy associated 5.
  
 
 0.515
TBC1D31
Uncharacterized protein.
    
 0.497
DCP1B
Decapping mRNA 1B.
    
 
 0.491
SMYD1
SET and MYND domain containing 1.
   
  0.474
ZHX3
Uncharacterized protein.
    
 
 0.469
FAM83A
Family with sequence similarity 83 member A.
      
 0.462
C20H16orf72
Chromosome 20 C16orf72 homolog.
      
 0.413
BARHL1
BarH like homeobox 1.
    
 0.405
DMBX1
Diencephalon/mesencephalon homeobox 1.
    
 0.404
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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