Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPAS1Neuronal PAS domain protein 1. (591 aa)    
Predicted Functional Partners:
LHX6
LIM homeobox 6.
    
 
 0.768
ARNT
Uncharacterized protein.
   
 0.709
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2.
   
 0.709
UBXN7
UBX domain-containing protein 7.
    
  0.695
ZSCAN30
Uncharacterized protein.
    
 
 0.669
R3HDM2
R3H domain containing 2.
      
 0.664
RYR3
Ryanodine receptor 3.
      
 0.654
BHLHE41
Basic helix-loop-helix family member e41.
    
 
 0.635
GABRB1
Gamma-aminobutyric acid type A receptor beta3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.622
CUL2
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.615
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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