STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF12RRM domain-containing protein. (267 aa)    
Predicted Functional Partners:
SRSF1
Uncharacterized protein.
   
 0.756
ENSMMUP00000041819
Uncharacterized protein.
   
 0.756
SRSF7
Serine and arginine rich splicing factor 7.
   
0.633
TRA2A
Transformer-2 protein homolog alpha.
   
0.586
TRA2B
Transformer 2 beta homolog.
   
0.581
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.573
CDK9
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
    
 0.573
SRSF9
Serine/arginine-rich splicing factor 9.
   
 0.543
FUS
Tripartite motif containing 72.
   
 0.539
SRSF5
Serine and arginine rich splicing factor 5.
   
0.533
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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