Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDM11PR/SET domain 11. (1229 aa)    
Predicted Functional Partners:
PRDM16
PR/SET domain 16.
    
 0.770
ZSCAN20
Zinc finger and SCAN domain containing 20.
    
 0.703
LRRC27
Leucine rich repeat containing 27.
      
 0.581
CD82
Tetraspanin.
     
 0.560
ARL15
ADP-ribosylation factor-like protein 15.
    
 0.519
TRIP11
Thyroid hormone receptor interactor 11.
   
 
 0.502
CBX8
Chromobox 8.
    
 
 0.484
PRDM5
Zinc finger protein.
    
 0.476
ERCC3
TFIIH basal transcription factor complex helicase XPB subunit.
   
   0.467
NEK9
Serine/threonine-protein kinase Nek9.
    
   0.466
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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