Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATOH7Atonal bHLH transcription factor 7. (152 aa)    
Predicted Functional Partners:
VSX2
Visual system homeobox 2.
      
 0.806
POU4F2
POU domain protein.
    
 
 0.773
FOXN4
Forkhead box N4.
      
 0.695
VSX1
Visual system homeobox 1.
      
 0.687
PAX6
Uncharacterized protein.
    
 
 0.662
ISL1
ISL LIM homeobox 1.
      
 0.645
GDF11
Growth differentiation factor 11.
   
  
 0.624
CRX
Cone-rod homeobox.
      
 0.611
ONECUT1
One cut domain family member.
      
 0.595
SNCG
Gamma-synuclein; Belongs to the synuclein family.
      
 0.591
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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