STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH7Atonal bHLH transcription factor 7. (152 aa)    
Predicted Functional Partners:
VSX2
Visual system homeobox 2.
   
  
 0.815
VSX1
Visual system homeobox 1.
   
  
 0.767
POU4F2
POU domain protein.
      
 0.718
FOXN4
Forkhead box N4.
   
  
 0.644
ISL1
ISL LIM homeobox 1.
   
  
 0.631
ONECUT1
One cut domain family member.
      
 0.607
PAX6
Uncharacterized protein.
      
 0.606
CRX
Cone-rod homeobox.
      
 0.583
SNCG
Gamma-synuclein; Belongs to the synuclein family.
      
 0.550
TCF12
Transcription factor 12 isoform a.
    
 
 0.524
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.