STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM1745 kDa-splicing factor. (401 aa)    
Predicted Functional Partners:
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.991
U2SURP
U2 snRNP associated SURP domain containing.
   
 0.981
SUGP1
Uncharacterized protein.
   
 
 0.944
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
 0.937
SF3B1
SF3b1 domain-containing protein.
   
 0.928
SF3A1
Splicing factor 3A subunit 1 isoform 1.
   
 0.920
SNRPA1
LRRcap domain-containing protein.
   
 0.916
SF3A2
Splicing factor 3a subunit 2.
    
 0.868
SF3A3
Splicing factor 3a subunit 3.
   
 0.851
PUF60
Poly(U) binding splicing factor 60.
   
 
0.821
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.