DNAH12 protein (Macaca mulatta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DNAH12

Uncharacterized protein. (457 aa)

Predicted Functional Partners:

SOD1

0.900

ENSMMUP00000062410

0.899

DNAH6

0.868

DNAH10

0.824

DNAH1

0.810

DNAH8

0.770

DNAH3

0.747

CFAP43

0.707

DNAH2

0.695

KIF12

0.681

Your Current Organism:

Macaca mulatta

NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CFAP43	DNAH1	ENSMMUP00000066780	ENSMMUP00000022331	Cilia and flagella associated protein 43.	Dynein axonemal heavy chain 1.	0.978
CFAP43	DNAH10	ENSMMUP00000066780	ENSMMUP00000012074	Cilia and flagella associated protein 43.	Dynein axonemal heavy chain 10.	0.916
CFAP43	DNAH12	ENSMMUP00000066780	ENSMMUP00000020095	Cilia and flagella associated protein 43.	Uncharacterized protein.	0.707
CFAP43	DNAH2	ENSMMUP00000066780	ENSMMUP00000010694	Cilia and flagella associated protein 43.	Dynein axonemal heavy chain 2.	0.840
CFAP43	DNAH3	ENSMMUP00000066780	ENSMMUP00000022026	Cilia and flagella associated protein 43.	Dynein axonemal heavy chain 3.	0.878
CFAP43	DNAH6	ENSMMUP00000066780	ENSMMUP00000025136	Cilia and flagella associated protein 43.	Dynein axonemal heavy chain 6.	0.973
CFAP43	DNAH8	ENSMMUP00000066780	ENSMMUP00000030784	Cilia and flagella associated protein 43.	Dynein axonemal heavy chain 8.	0.936
CFAP43	ENSMMUP00000062410	ENSMMUP00000066780	ENSMMUP00000062410	Cilia and flagella associated protein 43.	AAA_6 domain-containing protein.	0.707
DNAH1	CFAP43	ENSMMUP00000022331	ENSMMUP00000066780	Dynein axonemal heavy chain 1.	Cilia and flagella associated protein 43.	0.978
DNAH1	DNAH10	ENSMMUP00000022331	ENSMMUP00000012074	Dynein axonemal heavy chain 1.	Dynein axonemal heavy chain 10.	0.976
DNAH1	DNAH12	ENSMMUP00000022331	ENSMMUP00000020095	Dynein axonemal heavy chain 1.	Uncharacterized protein.	0.810
DNAH1	DNAH2	ENSMMUP00000022331	ENSMMUP00000010694	Dynein axonemal heavy chain 1.	Dynein axonemal heavy chain 2.	0.879
DNAH1	DNAH3	ENSMMUP00000022331	ENSMMUP00000022026	Dynein axonemal heavy chain 1.	Dynein axonemal heavy chain 3.	0.966
DNAH1	DNAH6	ENSMMUP00000022331	ENSMMUP00000025136	Dynein axonemal heavy chain 1.	Dynein axonemal heavy chain 6.	0.950
DNAH1	DNAH8	ENSMMUP00000022331	ENSMMUP00000030784	Dynein axonemal heavy chain 1.	Dynein axonemal heavy chain 8.	0.956
DNAH1	ENSMMUP00000062410	ENSMMUP00000022331	ENSMMUP00000062410	Dynein axonemal heavy chain 1.	AAA_6 domain-containing protein.	0.810
DNAH1	SOD1	ENSMMUP00000022331	ENSMMUP00000066269	Dynein axonemal heavy chain 1.	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.	0.900
DNAH10	CFAP43	ENSMMUP00000012074	ENSMMUP00000066780	Dynein axonemal heavy chain 10.	Cilia and flagella associated protein 43.	0.916
DNAH10	DNAH1	ENSMMUP00000012074	ENSMMUP00000022331	Dynein axonemal heavy chain 10.	Dynein axonemal heavy chain 1.	0.976
DNAH10	DNAH12	ENSMMUP00000012074	ENSMMUP00000020095	Dynein axonemal heavy chain 10.	Uncharacterized protein.	0.824